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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805026.1_cds_XP_016491686.1_8192
CDS Infomation

[gene=LOC107811292] [db_xref=GeneID:107811292] [protein=polyphenol oxidase E, chloroplastic-like isoform X2] [protein_id=XP_016491686.1] [location=complement(join(9303..9658,9900..10401,10562..11506))] [gbkey=CDS]
Sequence

ATGGCATCAAGTGTTATTTCACCAGTGTGCAATAGCACACCACTCAAAACACCCTTTACA
TCAACCACCAAGTCTTCTTCTTTAGCATCCACTCCAAAACCCTCTCAACTTTTCCTCCGC
GGAAAACGTAACCATAGCTTCAAAGTCTCATGCAAGGTCTCCAATGGTGATGAAAACAAA
ACTGTTGAAGCAAATTCTGTTGATAGGAGAAATGTTCTTCTAGGTTTAGGAGGTCTCTAT
GGTGCTTCTAATGTTGTACCATTGGCTTCAGCCACTCCCATTCCAGCCCCTACTACTTCA
TGTAGCAAGACTGGCGCCACAATTAAACCCGGTGTACCAGTACCTTATTCTTGTTGCCCC
CCTCCGCTAAAAATTGATCCTAAGGATATTCCTTATTACAAGTTTCCAACAGGGTCCAAG
CTCCGTATTCGGCCAGCTTCTCATGCCGTGGATGAAGAGTACATGGCTAAGTACAACTTA
GCCATTACTAAAATGAAGGAGCTCGACGTCACCGATCCAGATGATCCACGTGGATTCACG
GCGCAAGCCAAAATCCACTGTGCTTATTGCAATGGTGCATACACCGTCGCTGGCAAAGAG
CTACAAATTCACTTCTCATGGCTTTTTTTCCCATTCCATAGATGGTATTTGTACTTCTAT
GAAAGAATCTTGGGCTCTTTAATCAATGATCCTACTTTTGGTTTGCCATATTGGAACTGG
GATCATCCAAAGGGCATGCGTTTGCCACACATGTTTGATCAACCAAACGTGTACCCTGAT
CTTTACGATCCAAGACGTAACCAAGAACACCGTGGTTCTGTAATCATGGACCTTGGTCAT
TTTGGTCAAGACGTGAAAGGAACTGACTTGCAAATGATGAGCAATAACCTTACTCTAATG
TATCGTCAAATGATTACCAATTCACCATGTCCACAACTCTTTTTCGGTAAGCCATATTGT
ACGGAAGTTGGACCCAAACCAGGGCAGGGAGCTATTGAAAACATCCCTCATACTCCTGTC
CACATTTGGGTTGGTAGTAAGCCTAATGAGAATAACTGTAAAAACGGTGAAGATATGGGA
AATTTCTATTCAGCTGGTAAGGATCCTGCTTTCTATAGTCACCATGCAAATGTAGATCGC
ATGTGGACAATATGGAAAACATTAGGAGGAAAACGCAAGGACATCAACAAGCCAGATTAT
TTGAACACTGAGTTCTTTTTCTACGACGAGAAGAAAAACCCTTATCTCGTCAAAGTCCGT
GACTGTTTGGACAATAAGAAAATGGGATATGATTTCCAAGCAATGCCAACCCCATGGCGT
AATTTTAAGCCATTGAAGAAGAGCAAGAGCAAGGTCAATGCACGTTCGGTTCAGTCAGCT
ACCCAAACATTCCCTATTGCAAAGATTGACAAACCCATAACATTTTCTATCAAAAGGGAA
ACTTCAGGCAGGACTCAGCAGGAGAAAGACGCAAAAGAGGAGATGTTAACTTTCTTGGAA
CTCAACATTGATCAGCGAAAGCACATAAGGTTTGATGTCTTCATTAACGCAGATGCAAAC
TCCAACTGGCATGAGCTAGACAGGGCAGAGTTTGCAGGAAGTTACACTGCCTTGCCTCAT
GTTCATTCAGATCCCAGTAAACCACATGTCGCCCCTGTTGCAAAATTCCAGCTGGCCATT
ACCGAGTTGCTCGAGGAAATTGGCCTTGAAGATGAAGATGATATAGTGGTGACTCTGGTC
CCGAAAACTGGGGGCGAATTTGTCGCCATTAAATCTGTGGTTATTACACTTGAAGCTTGT
TGA

Peptide Sequence

PEP ID

XP_016491686.1
PEP Infomation

PREDICTED: polyphenol oxidase E, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MASSVISPVCNSTPLKTPFTSTTKSSSLASTPKPSQLFLRGKRNHSFKVSCKVSNGDENK
TVEANSVDRRNVLLGLGGLYGASNVVPLASATPIPAPTTSCSKTGATIKPGVPVPYSCCP
PPLKIDPKDIPYYKFPTGSKLRIRPASHAVDEEYMAKYNLAITKMKELDVTDPDDPRGFT
AQAKIHCAYCNGAYTVAGKELQIHFSWLFFPFHRWYLYFYERILGSLINDPTFGLPYWNW
DHPKGMRLPHMFDQPNVYPDLYDPRRNQEHRGSVIMDLGHFGQDVKGTDLQMMSNNLTLM
YRQMITNSPCPQLFFGKPYCTEVGPKPGQGAIENIPHTPVHIWVGSKPNENNCKNGEDMG
NFYSAGKDPAFYSHHANVDRMWTIWKTLGGKRKDINKPDYLNTEFFFYDEKKNPYLVKVR
DCLDNKKMGYDFQAMPTPWRNFKPLKKSKSKVNARSVQSATQTFPIAKIDKPITFSIKRE
TSGRTQQEKDAKEEMLTFLELNIDQRKHIRFDVFINADANSNWHELDRAEFAGSYTALPH
VHSDPSKPHVAPVAKFQLAITELLEEIGLEDEDDIVVTLVPKTGGEFVAIKSVVITLEAC

Transcript Sequence

Gene sequence data has not been registered.